PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BS_B7A8F8CD8.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 363aa    MW: 40334.5 Da    PI: 7.0756
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BS_B7A8F8CD8.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.5e-115785533
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                           k +rr+++NReAAr+sR+RKka+i++Le 
  Traes_4BS_B7A8F8CD8.1 57 KTTRRLAQNREAARKSRLRKKAYIQQLES 85
                           789************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-653116IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0715599IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.7E-75698No hitNo description
PfamPF001701.4E-85793IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.3E-858101No hitNo description
PROSITE patternPS0003606075IPR004827Basic-leucine zipper domain
PfamPF141443.4E-30137211IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MDSSDHHQHQ QQQQQGMVGL VTVSGQFHQI SQQQHQQQKM ATSSTHSDRT GKALDPKTTR  60
RLAQNREAAR KSRLRKKAYI QQLESGKLKL AQLEQDLQRA RSQGLLVGGA PGGNSSPGAA  120
MFDVEYNRWL DDDSRRMIEL RGGLHAHLPD GDLRAIIDDT LTHYDELFRL KSAAARADVF  180
HLITGMWATP AERCFLWMGG FRPSDLLKTL APQLDPLTEQ QMVGICSLEQ SLQQAEEALT  240
QGLEQLHQSL AITVAGSGSL SDDTNMGSFM GDMAVALGKL ANLEGFVIQA DNLRQQTLHQ  300
MHRILTVRQA ARCFLAIGEY HNRLRALSSL WASRPREILM TDDGNCGELS IAAHPSESQY  360
SAY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3702880.0AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015617800.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
SwissprotP239231e-125HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-124HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLW5ED100.0W5ED10_WHEAT; Uncharacterized protein
STRINGMLOC_17690.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-139bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]